IL_4W29_002
3D structure
- PDB id
- 4W29 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome translocation intermediate containing elongation factor EFG/GDP/fusidic acid, mRNA, and tRNAs trapped in the AP/AP pe/E chimeric hybrid state.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.8 Å
Loop
- Sequence
- GUG*CGAC
- Length
- 7 nucleotides
- Bulged bases
- 4W29|1|AA|A|397
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4W29_002 not in the Motif Atlas
- Geometric match to IL_7A0S_092
- Geometric discrepancy: 0.2765
- The information below is about IL_7A0S_092
- Detailed Annotation
- Other IL
- Broad Annotation
- Other IL
- Motif group
- IL_10167.3
- Basepair signature
- cWW-cHW-cWW
- Number of instances in this motif group
- 49
Unit IDs
4W29|1|AA|G|44
4W29|1|AA|U|45
4W29|1|AA|G|46
*
4W29|1|AA|C|395
4W29|1|AA|G|396
4W29|1|AA|A|397
4W29|1|AA|C|398
Current chains
- Chain AA
- 16S Ribosomal RNA
Nearby chains
- Chain AP
- 30S ribosomal protein S16
- Chain AY
- Elongation factor G
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