IL_4W29_029
3D structure
- PDB id
- 4W29 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome translocation intermediate containing elongation factor EFG/GDP/fusidic acid, mRNA, and tRNAs trapped in the AP/AP pe/E chimeric hybrid state.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.8 Å
Loop
- Sequence
- UGAAAGAC*GGGGAG
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4W29_029 not in the Motif Atlas
- Homologous match to IL_4LFB_026
- Geometric discrepancy: 0.3266
- The information below is about IL_4LFB_026
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_78349.3
- Basepair signature
- cWW-L-R-L-R-L-R-L-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
4W29|1|AA|U|605
4W29|1|AA|G|606
4W29|1|AA|A|607
4W29|1|AA|A|608
4W29|1|AA|A|609
4W29|1|AA|G|610
4W29|1|AA|A|611
4W29|1|AA|C|612
*
4W29|1|AA|G|628
4W29|1|AA|G|629
4W29|1|AA|G|630
4W29|1|AA|G|631
4W29|1|AA|A|632
4W29|1|AA|G|633
Current chains
- Chain AA
- 16S Ribosomal RNA
Nearby chains
- Chain AD
- 30S ribosomal protein S4
- Chain AH
- 30S ribosomal protein S8
- Chain AP
- 30S ribosomal protein S16
- Chain AQ
- 30S ribosomal protein S17
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