IL_4W29_101
3D structure
- PDB id
- 4W29 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome translocation intermediate containing elongation factor EFG/GDP/fusidic acid, mRNA, and tRNAs trapped in the AP/AP pe/E chimeric hybrid state.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.8 Å
Loop
- Sequence
- CCAG*CUG
- Length
- 7 nucleotides
- Bulged bases
- 4W29|1|BA|C|995
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4W29_101 not in the Motif Atlas
- Geometric match to IL_4WF9_017
- Geometric discrepancy: 0.2403
- The information below is about IL_4WF9_017
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_71625.3
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 79
Unit IDs
4W29|1|BA|C|994
4W29|1|BA|C|995
4W29|1|BA|A|996
4W29|1|BA|G|997
*
4W29|1|BA|C|1158
4W29|1|BA|U|1159
4W29|1|BA|G|1160
Current chains
- Chain BA
- 23S Ribosomal RNA
Nearby chains
- Chain B3
- 50S ribosomal protein L30
- Chain BN
- 50S ribosomal protein L13
- Chain BU
- 50S ribosomal protein L20
- Chain BV
- 50S ribosomal protein L21
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