IL_4W29_393
3D structure
- PDB id
- 4W29 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome translocation intermediate containing elongation factor EFG/GDP/fusidic acid, mRNA, and tRNAs trapped in the AP/AP pe/E chimeric hybrid state.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.8 Å
Loop
- Sequence
- UGG*CUG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4W29_393 not in the Motif Atlas
- Geometric match to IL_7A0S_107
- Geometric discrepancy: 0.3431
- The information below is about IL_7A0S_107
- Detailed Annotation
- Isolated non-canonical cWW
- Broad Annotation
- Isolated non-canonical cWW
- Motif group
- IL_10289.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 236
Unit IDs
4W29|1|DB|U|80
4W29|1|DB|G|81
4W29|1|DB|G|82
*
4W29|1|DB|C|94
4W29|1|DB|U|95
4W29|1|DB|G|96
Current chains
- Chain DB
- 5S Ribosomal RNA
Nearby chains
- Chain D3
- 50S ribosomal protein L30
- Chain DA
- Large subunit ribosomal RNA; LSU rRNA
- Chain DQ
- 50S ribosomal protein L16
- Chain DZ
- 50S ribosomal protein L25
Coloring options: