IL_4W4G_108

3D structure

PDB id

4W4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Postcleavage state of 70S bound to HigB toxin and AAA (lysine) codon

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GUUG*CAUC

Length

8 nucleotides

Bulged bases

4W4G|1|RA|U|1061

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4W4G_108 not in the Motif Atlas

Homologous match to IL_6PRV_001

Geometric discrepancy: 0.2086

The information below is about IL_6PRV_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_92446.2

Basepair signature

cWW-cWW-R-L-L

Number of instances in this motif group

5

Unit IDs

4W4G|1|RA|G|1059
4W4G|1|RA|U|1060
4W4G|1|RA|U|1061
4W4G|1|RA|G|1062
*
4W4G|1|RA|C|1076
4W4G|1|RA|A|1077
4W4G|1|RA|U|1078
4W4G|1|RA|C|1079

Current chains

Chain RA

23S rRNA

Nearby chains