IL_4WFA_010

3D structure

PDB id

4WFA (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with linezolid

Experimental method

X-RAY DIFFRACTION

Resolution

3.39 Å

Loop

Sequence

CCAA*UUGG

Length

8 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WFA_010 not in the Motif Atlas

Geometric match to IL_7R9F_001

Geometric discrepancy: 0.3293

The information below is about IL_7R9F_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_59580.1

Basepair signature

cWW-cHW-cWW-cWW

Number of instances in this motif group

5

Unit IDs

4WFA|1|X|C|276
4WFA|1|X|C|277
4WFA|1|X|A|278
4WFA|1|X|A|279
*
4WFA|1|X|U|292
4WFA|1|X|U|293
4WFA|1|X|G|294
4WFA|1|X|G|295

Current chains

Chain X

23S rRNA

Nearby chains