IL_4WQF_141
3D structure
- PDB id
- 4WQF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.8 Å
Loop
- Sequence
- GUGCCAG*CGGUAAUAC
- Length
- 16 nucleotides
- Bulged bases
- 4WQF|1|BA|A|532, 4WQF|1|BA|U|534
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4WQF_141 not in the Motif Atlas
- Geometric match to IL_4V88_415
- Geometric discrepancy: 0.1224
- The information below is about IL_4V88_415
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_54177.1
- Basepair signature
- cWW-cSW-tWH-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 5
Unit IDs
4WQF|1|BA|G|515
4WQF|1|BA|U|516
4WQF|1|BA|G|517
4WQF|1|BA|C|518
4WQF|1|BA|C|519
4WQF|1|BA|A|520
4WQF|1|BA|G|521
*
4WQF|1|BA|C|528
4WQF|1|BA|G|529
4WQF|1|BA|G|530
4WQF|1|BA|U|531
4WQF|1|BA|A|532
4WQF|1|BA|A|533
4WQF|1|BA|U|534
4WQF|1|BA|A|535
4WQF|1|BA|C|536
Current chains
- Chain BA
- 16S Ribosomal RNA
Nearby chains
- Chain BC
- 30S ribosomal protein S3
- Chain BD
- 30S ribosomal protein S4
- Chain BL
- 30S ribosomal protein S12
- Chain BZ
- 50S ribosomal protein L9,Elongation factor G
Coloring options: