IL_4WQU_176
3D structure
- PDB id
- 4WQU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycin
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.8 Å
Loop
- Sequence
- GAUG*CUAAUC
- Length
- 10 nucleotides
- Bulged bases
- 4WQU|1|BA|U|1257, 4WQU|1|BA|A|1280, 4WQU|1|BA|U|1281
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4WQU_176 not in the Motif Atlas
- Homologous match to IL_6CZR_161
- Geometric discrepancy: 0.2615
- The information below is about IL_6CZR_161
- Detailed Annotation
- 180 degree turn
- Broad Annotation
- No text annotation
- Motif group
- IL_11344.1
- Basepair signature
- cWW-cSS-L-R-cWW
- Number of instances in this motif group
- 3
Unit IDs
4WQU|1|BA|G|1255
4WQU|1|BA|A|1256
4WQU|1|BA|U|1257
4WQU|1|BA|G|1258
*
4WQU|1|BA|C|1277
4WQU|1|BA|U|1278
4WQU|1|BA|A|1279
4WQU|1|BA|A|1280
4WQU|1|BA|U|1281
4WQU|1|BA|C|1282
Current chains
- Chain BA
- 16S Ribosomal RNA
Nearby chains
- Chain BC
- 30S ribosomal protein S3
- Chain BI
- 30S ribosomal protein S9
- Chain BJ
- 30S ribosomal protein S10
- Chain BN
- 30S ribosomal protein S14 type Z
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