IL_4WQY_103

3D structure

PDB id

4WQY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

UUGAG*CAAGAUGAG

Length

14 nucleotides

Bulged bases

4WQY|1|AA|G|2793

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WQY_103 not in the Motif Atlas

Homologous match to IL_7RQB_102

Geometric discrepancy: 0.0594

The information below is about IL_7RQB_102

Detailed Annotation

tSH-tHS-tHW

Broad Annotation

tSH-tHS-tHW

Motif group

IL_04638.1

Basepair signature

cWW-tSH-tHW-tHS-cSH-cWW-L

Number of instances in this motif group

5

Unit IDs

4WQY|1|AA|U|2648
4WQY|1|AA|U|2649
4WQY|1|AA|G|2650
4WQY|1|AA|A|2651
4WQY|1|AA|G|2652
*
4WQY|1|AA|C|2787
4WQY|1|AA|A|2788
4WQY|1|AA|A|2789
4WQY|1|AA|G|2790
4WQY|1|AA|A|2791
4WQY|1|AA|U|2792
4WQY|1|AA|G|2793
4WQY|1|AA|A|2794
4WQY|1|AA|G|2795

Current chains

Chain AA

23S Ribosomal RNA

Nearby chains

Chain AE

50S ribosomal protein L3

Chain AN

50S ribosomal protein L13