IL_4WQY_107

3D structure

PDB id

4WQY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CU*AUAAG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WQY_107 not in the Motif Atlas

Homologous match to IL_7A0S_097

Geometric discrepancy: 0.0602

The information below is about IL_7A0S_097

Detailed Annotation

Multiple bulged bases

Broad Annotation

Multiple bulged bases

Motif group

IL_44609.2

Basepair signature

cWW-cWW

Number of instances in this motif group

24

Unit IDs

4WQY|1|AA|C|2707
4WQY|1|AA|U|2708
*
4WQY|1|AA|A|2723
4WQY|1|AA|U|2724
4WQY|1|AA|A|2725
4WQY|1|AA|A|2726
4WQY|1|AA|G|2727

Current chains

Chain AA

23S Ribosomal RNA

Nearby chains

Chain AR

50S ribosomal protein L17

Chain AT

50S ribosomal protein L19