IL_4WQY_124

3D structure

PDB id

4WQY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

UGAC*GG

Length

6 nucleotides

Bulged bases

4WQY|1|BA|G|129|||A, 4WQY|1|BA|A|130

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WQY_124 not in the Motif Atlas

Homologous match to IL_6CZR_119

Geometric discrepancy: 0.1144

The information below is about IL_6CZR_119

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_33761.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

4

Unit IDs

4WQY|1|BA|U|129
4WQY|1|BA|G|129|||A
4WQY|1|BA|A|130
4WQY|1|BA|C|131
*
4WQY|1|BA|G|231
4WQY|1|BA|G|232

Current chains

Chain BA

16S Ribosomal RNA

Nearby chains

Chain BP

30S ribosomal protein S16

Chain BQ

30S ribosomal protein S17

Chain BT

30S ribosomal protein S20