IL_4WQY_141

3D structure

PDB id

4WQY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CGUAAAG*CG

Length

9 nucleotides

Bulged bases

4WQY|1|BA|A|572

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WQY_141 not in the Motif Atlas

Homologous match to IL_4LFB_022

Geometric discrepancy: 0.0744

The information below is about IL_4LFB_022

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_20847.1

Basepair signature

cWW-L-cWW-L-L-R

Number of instances in this motif group

5

Unit IDs

4WQY|1|BA|C|569
4WQY|1|BA|G|570
4WQY|1|BA|U|571
4WQY|1|BA|A|572
4WQY|1|BA|A|573
4WQY|1|BA|A|574
4WQY|1|BA|G|575
*
4WQY|1|BA|C|880
4WQY|1|BA|G|881

Current chains

Chain BA

16S Ribosomal RNA

Nearby chains

Chain BE

30S ribosomal protein S5

Chain BL

30S ribosomal protein S12

Chain BQ

30S ribosomal protein S17