IL_4WQY_170

3D structure

PDB id

4WQY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CAC*GG

Length

5 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WQY_170 not in the Motif Atlas

Geometric match to IL_4LFB_054

Geometric discrepancy: 0.1824

The information below is about IL_4LFB_054

Detailed Annotation

Minor groove platform

Broad Annotation

No text annotation

Motif group

IL_34520.1

Basepair signature

cWW-cSH-cWW

Number of instances in this motif group

58

Unit IDs

4WQY|1|BA|C|1260
4WQY|1|BA|A|1261
4WQY|1|BA|C|1262
*
4WQY|1|BA|G|1273
4WQY|1|BA|G|1274

Current chains

Chain BA

16S Ribosomal RNA

Nearby chains

Chain BS

30S ribosomal protein S19

Chain BU

30S ribosomal protein Thx