IL_4WQY_213

3D structure

PDB id

4WQY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CGC*GCG

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary: CGC,GCG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WQY_213 not in the Motif Atlas

Geometric match to IL_4WF9_042

Geometric discrepancy: 0.1786

The information below is about IL_4WF9_042

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

213

Unit IDs

4WQY|1|CA|C|992
4WQY|1|CA|G|993
4WQY|1|CA|C|994
*
4WQY|1|CA|G|1160
4WQY|1|CA|C|1161
4WQY|1|CA|G|1162

Current chains

Chain CA

23S Ribosomal RNA

Nearby chains

Chain CU

50S ribosomal protein L20

Chain CV

50S ribosomal protein L21