IL_4WQY_214

3D structure

PDB id

4WQY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CCA*UG

Length

5 nucleotides

Bulged bases

4WQY|1|CA|C|995

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WQY_214 not in the Motif Atlas

Geometric match to IL_7RQB_035

Geometric discrepancy: 0.1353

The information below is about IL_7RQB_035

Detailed Annotation

Single bulged C

Broad Annotation

No text annotation

Motif group

IL_61258.12

Basepair signature

cWW-L-cWW

Number of instances in this motif group

40

Unit IDs

4WQY|1|CA|C|994
4WQY|1|CA|C|995
4WQY|1|CA|A|996
*
4WQY|1|CA|U|1159
4WQY|1|CA|G|1160

Current chains

Chain CA

23S Ribosomal RNA

Nearby chains

Chain C3

50S ribosomal protein L30

Chain CN

50S ribosomal protein L13

Chain CU

50S ribosomal protein L20

Chain CV

50S ribosomal protein L21