IL_4WQY_221

3D structure

PDB id

4WQY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GUUG*CAUC

Length

8 nucleotides

Bulged bases

4WQY|1|CA|U|1061

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WQY_221 not in the Motif Atlas

Homologous match to IL_5J7L_285

Geometric discrepancy: 0.2777

The information below is about IL_5J7L_285

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_92446.2

Basepair signature

cWW-cWW-R-L-L

Number of instances in this motif group

5

Unit IDs

4WQY|1|CA|G|1059
4WQY|1|CA|U|1060
4WQY|1|CA|U|1061
4WQY|1|CA|G|1062
*
4WQY|1|CA|C|1076
4WQY|1|CA|A|1077
4WQY|1|CA|U|1078
4WQY|1|CA|C|1079

Current chains

Chain CA

23S Ribosomal RNA

Nearby chains

Chain CL

50S ribosomal protein L11

Chain CQ

50S ribosomal protein L16

Chain CZ

50S ribosomal protein L25