IL_4WQY_232

3D structure

PDB id

4WQY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CGAUG*CUAAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WQY_232 not in the Motif Atlas

Homologous match to IL_7RQB_055

Geometric discrepancy: 0.0856

The information below is about IL_7RQB_055

Detailed Annotation

UAA/GAN

Broad Annotation

No text annotation

Motif group

IL_89002.2

Basepair signature

cWW-tWH-L-tHS-cWW

Number of instances in this motif group

20

Unit IDs

4WQY|1|CA|C|1417
4WQY|1|CA|G|1418
4WQY|1|CA|A|1419
4WQY|1|CA|U|1420
4WQY|1|CA|G|1421
*
4WQY|1|CA|C|1577
4WQY|1|CA|U|1578
4WQY|1|CA|A|1579
4WQY|1|CA|A|1580
4WQY|1|CA|G|1581

Current chains

Chain CA

23S Ribosomal RNA

Nearby chains