IL_4WQY_289

3D structure

PDB id

4WQY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GAUAAC*GGAAGC

Length

12 nucleotides

Bulged bases

4WQY|1|CA|A|2765

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WQY_289 not in the Motif Atlas

Homologous match to IL_5J7L_350

Geometric discrepancy: 0.1608

The information below is about IL_5J7L_350

Detailed Annotation

UAA/GAN with extra cWW

Broad Annotation

No text annotation

Motif group

IL_49767.8

Basepair signature

cWW-cWW-tWH-L-tHS-cWW

Number of instances in this motif group

6

Unit IDs

4WQY|1|CA|G|2737
4WQY|1|CA|A|2738
4WQY|1|CA|U|2739
4WQY|1|CA|A|2740
4WQY|1|CA|A|2741
4WQY|1|CA|C|2742
*
4WQY|1|CA|G|2762
4WQY|1|CA|G|2763
4WQY|1|CA|A|2764
4WQY|1|CA|A|2765
4WQY|1|CA|G|2766
4WQY|1|CA|C|2767

Current chains

Chain CA

23S Ribosomal RNA

Nearby chains

Chain C9

50S ribosomal protein L36

Chain CH

50S ribosomal protein L6

Chain CN

50S ribosomal protein L13