IL_4WQY_332
3D structure
- PDB id
- 4WQY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.8 Å
Loop
- Sequence
- GGAGUACG*UGAAAC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4WQY_332 not in the Motif Atlas
- Homologous match to IL_4LFB_034
- Geometric discrepancy: 0.0685
- The information below is about IL_4LFB_034
- Detailed Annotation
- 8x6 Sarcin-Ricin with inserted Y; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_84044.1
- Basepair signature
- cWW-tSH-tHH-cSH-tWH-tHS-cWW-L
- Number of instances in this motif group
- 5
Unit IDs
4WQY|1|DA|G|887
4WQY|1|DA|G|888
4WQY|1|DA|A|889
4WQY|1|DA|G|890
4WQY|1|DA|U|891
4WQY|1|DA|A|892
4WQY|1|DA|C|893
4WQY|1|DA|G|894
*
4WQY|1|DA|U|905
4WQY|1|DA|G|906
4WQY|1|DA|A|907
4WQY|1|DA|A|908
4WQY|1|DA|A|909
4WQY|1|DA|C|910
Current chains
- Chain DA
- 16S Ribosomal RNA
Nearby chains
- Chain DL
- 30S ribosomal protein S12
- Chain DQ
- 30S ribosomal protein S17
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