IL_4WQY_391

3D structure

PDB id

4WQY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CCUGUGAAC*GGGAGG

Length

15 nucleotides

Bulged bases

4WQY|1|AA|U|2154

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WQY_391 not in the Motif Atlas

Geometric match to IL_6HCT_001

Geometric discrepancy: 0.376

The information below is about IL_6HCT_001

Detailed Annotation

Kink-turn

Broad Annotation

No text annotation

Motif group

IL_64900.1

Basepair signature

cWW-cWW-tSS-tSH-L-tHS-R-cWW-L

Number of instances in this motif group

3

Unit IDs

4WQY|1|AA|C|2150
4WQY|1|AA|C|2151
4WQY|1|AA|U|2152
4WQY|1|AA|G|2153
4WQY|1|AA|U|2154
4WQY|1|AA|G|2155
4WQY|1|AA|A|2156
4WQY|1|AA|A|2157
4WQY|1|AA|C|2158
*
4WQY|1|AA|G|2177
4WQY|1|AA|G|2178
4WQY|1|AA|G|2179
4WQY|1|AA|A|2180
4WQY|1|AA|G|2181
4WQY|1|AA|G|2182

Current chains

Chain AA

23S Ribosomal RNA

Nearby chains

Chain AC

50S ribosomal protein L1