IL_4WR6_025
3D structure
- PDB id
- 4WR6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.05 Å
Loop
- Sequence
- GGACG*CGGUAC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4WR6_025 not in the Motif Atlas
- Geometric match to IL_6CZR_130
- Geometric discrepancy: 0.1377
- The information below is about IL_6CZR_130
- Detailed Annotation
- 6x5 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_88269.3
- Basepair signature
- cWW-L-R-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 4
Unit IDs
4WR6|1|13|G|446||||P_1
4WR6|1|13|G|447||||P_1
4WR6|1|13|A|448||||P_1
4WR6|1|13|C|449||||P_1
4WR6|1|13|G|450||||P_1
*
4WR6|1|13|C|483||||P_1
4WR6|1|13|G|484||||P_1
4WR6|1|13|G|485||||P_1
4WR6|1|13|U|486||||P_1
4WR6|1|13|A|487||||P_1
4WR6|1|13|C|488||||P_1
Current chains
- Chain 13
- 16S ribosomal RNA
Nearby chains
- Chain 14
- Large subunit ribosomal RNA; LSU rRNA
- Chain 3E
- 30S ribosomal protein S4
- Chain 7I
- 30S ribosomal protein S16
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