IL_4WR6_085
3D structure
- PDB id
- 4WR6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.05 Å
Loop
- Sequence
- GAAC*GAGUGAAAUAGAGC
- Length
- 18 nucleotides
- Bulged bases
- 4WR6|1|14|U|504||||P_1, 4WR6|1|14|G|508||||P_1
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4WR6_085 not in the Motif Atlas
- Homologous match to IL_7RQB_014
- Geometric discrepancy: 0.0743
- The information below is about IL_7RQB_014
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_60992.6
- Basepair signature
- cWW-cWS-tSH-L-tHH-tWH-cWW-tSS-tSH-L-L
- Number of instances in this motif group
- 6
Unit IDs
4WR6|1|14|G|481||||P_1
4WR6|1|14|A|482||||P_1
4WR6|1|14|A|483||||P_1
4WR6|1|14|C|484||||P_1
*
4WR6|1|14|G|496||||P_1
4WR6|1|14|A|497||||P_1
4WR6|1|14|G|498||||P_1
4WR6|1|14|U|499||||P_1
4WR6|1|14|G|500||||P_1
4WR6|1|14|A|501||||P_1
4WR6|1|14|A|502||||P_1
4WR6|1|14|A|503||||P_1
4WR6|1|14|U|504||||P_1
4WR6|1|14|A|505||||P_1
4WR6|1|14|G|506||||P_1
4WR6|1|14|A|507||||P_1
4WR6|1|14|G|508||||P_1
4WR6|1|14|C|509||||P_1
Current chains
- Chain 14
- 23S ribosomal RNA
Nearby chains
- Chain A5
- 50S ribosomal protein L22
- Chain C5
- 50S ribosomal protein L24
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