IL_4WR6_186
3D structure
- PDB id
- 4WR6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.05 Å
Loop
- Sequence
- CAC*GUG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary: CAC,GUG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4WR6_186 not in the Motif Atlas
- Geometric match to IL_3SZX_003
- Geometric discrepancy: 0.1768
- The information below is about IL_3SZX_003
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_87907.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 179
Unit IDs
4WR6|1|16|C|28||||P_1
4WR6|1|16|A|29||||P_1
4WR6|1|16|C|30||||P_1
*
4WR6|1|16|G|54||||P_1
4WR6|1|16|U|55||||P_1
4WR6|1|16|G|56||||P_1
Current chains
- Chain 16
- 5S ribosomal RNA
Nearby chains
- Chain 41
- 50S ribosomal protein L5
- Chain A8
- 50S ribosomal protein L18
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