IL_4WRA_217
3D structure
- PDB id
- 4WRA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site and with antibiotic paromomycin.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.05 Å
Loop
- Sequence
- UGAAAGAC*GGGGAG
- Length
- 14 nucleotides
- Bulged bases
- 4WRA|1|1G|A|632
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4WRA_217 not in the Motif Atlas
- Geometric match to IL_5J7L_030
- Geometric discrepancy: 0.3405
- The information below is about IL_5J7L_030
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_78349.3
- Basepair signature
- cWW-L-R-L-R-L-R-L-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
4WRA|1|1G|U|605
4WRA|1|1G|G|606
4WRA|1|1G|A|607
4WRA|1|1G|A|608
4WRA|1|1G|A|609
4WRA|1|1G|G|610
4WRA|1|1G|A|611
4WRA|1|1G|C|612
*
4WRA|1|1G|G|628
4WRA|1|1G|G|629
4WRA|1|1G|G|630
4WRA|1|1G|G|631
4WRA|1|1G|A|632
4WRA|1|1G|G|633
Current chains
- Chain 1G
- 16S ribosomal RNA
Nearby chains
- Chain 32
- 30S ribosomal protein S4
- Chain 72
- 30S ribosomal protein S8
- Chain 7A
- 30S ribosomal protein S16
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