IL_4WT1_241
3D structure
- PDB id
- 4WT1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.05 Å
Loop
- Sequence
- UGG*UCAGCA
- Length
- 9 nucleotides
- Bulged bases
- 4WT1|1|1G|C|1200, 4WT1|1|1G|A|1201
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4WT1_241 not in the Motif Atlas
- Geometric match to IL_4V88_451
- Geometric discrepancy: 0.2459
- The information below is about IL_4V88_451
- Detailed Annotation
- Minor groove platform with extra cWW
- Broad Annotation
- Minor groove platform
- Motif group
- IL_97255.1
- Basepair signature
- cWW-tSH-L-cWW-L
- Number of instances in this motif group
- 5
Unit IDs
4WT1|1|1G|U|1056
4WT1|1|1G|G|1057
4WT1|1|1G|G|1058
*
4WT1|1|1G|U|1199
4WT1|1|1G|C|1200
4WT1|1|1G|A|1201
4WT1|1|1G|G|1202
4WT1|1|1G|C|1203
4WT1|1|1G|A|1204
Current chains
- Chain 1G
- 16S ribosomal RNA
Nearby chains
- Chain 1A
- 30S ribosomal protein S10
- Chain 22
- 30S ribosomal protein S3
- Chain 5A
- 30S ribosomal protein S14 type Z
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