3D structure

PDB id
4WT8 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex
Experimental method
X-RAY DIFFRACTION
Resolution
3.4 Å

Loop

Sequence
GCAAU*AC
Length
7 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4WT8_016 not in the Motif Atlas
Geometric match to IL_5J7L_018
Geometric discrepancy: 0.0989
The information below is about IL_5J7L_018
Detailed Annotation
C-loop
Broad Annotation
No text annotation
Motif group
IL_03109.3
Basepair signature
cWW-cWS-tWH-cWW-L
Number of instances in this motif group
6

Unit IDs

4WT8|1|Ab|G|367
4WT8|1|Ab|C|368
4WT8|1|Ab|A|369
4WT8|1|Ab|A|370
4WT8|1|Ab|U|371
*
4WT8|1|Ab|A|385
4WT8|1|Ab|C|386

Current chains

Chain Ab
RNA (1504-MER)

Nearby chains

Chain AP
30S ribosomal protein S16

Coloring options:


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