IL_4WT8_053

3D structure

PDB id

4WT8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

CCG*CAAG

Length

7 nucleotides

Bulged bases

4WT8|1|Ab|C|1383, 4WT8|1|Ab|A|1481

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WT8_053 not in the Motif Atlas

Homologous match to IL_4LFB_056

Geometric discrepancy: 0.1573

The information below is about IL_4LFB_056

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61438.4

Basepair signature

cWW-L-cWW

Number of instances in this motif group

4

Unit IDs

4WT8|1|Ab|C|1382
4WT8|1|Ab|C|1383
4WT8|1|Ab|G|1384
*
4WT8|1|Ab|C|1479
4WT8|1|Ab|A|1480
4WT8|1|Ab|A|1481
4WT8|1|Ab|G|1482

Current chains

Chain Ab

RNA (1504-MER)

Nearby chains

Chain A2

mRNA

Chain C4

Transfer RNA; tRNA