IL_4WT8_092
3D structure
- PDB id
- 4WT8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- GGAAUU*AGGAAC
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4WT8_092 not in the Motif Atlas
- Homologous match to IL_4LFB_030
- Geometric discrepancy: 0.0617
- The information below is about IL_4LFB_030
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_04668.2
- Basepair signature
- cWW-cWW-cWW-L-R-L-R-cWW
- Number of instances in this motif group
- 8
Unit IDs
4WT8|1|Bb|G|657
4WT8|1|Bb|G|658
4WT8|1|Bb|A|659
4WT8|1|Bb|A|660
4WT8|1|Bb|U|661
4WT8|1|Bb|U|662
*
4WT8|1|Bb|A|696
4WT8|1|Bb|G|697
4WT8|1|Bb|G|698
4WT8|1|Bb|A|699
4WT8|1|Bb|A|700
4WT8|1|Bb|C|701
Current chains
- Chain Bb
- RNA (1504-MER)
Nearby chains
- Chain BF
- 30S ribosomal protein S6
- Chain BK
- 30S ribosomal protein S11
- Chain BS
- 30S ribosomal protein S18
- Chain DB
- 50S ribosomal protein L2
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