IL_4WT8_116
3D structure
- PDB id
- 4WT8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- GUC*GUC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4WT8_116 not in the Motif Atlas
- Geometric match to IL_4ZC7_004
- Geometric discrepancy: 0.1668
- The information below is about IL_4ZC7_004
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_87907.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 179
Unit IDs
4WT8|1|Bb|G|1388
4WT8|1|Bb|U|1389
4WT8|1|Bb|C|1390
*
4WT8|1|Bb|G|1472
4WT8|1|Bb|U|1473
4WT8|1|Bb|C|1474
Current chains
- Chain Bb
- RNA (1504-MER)
Nearby chains
- Chain B2
- mRNA
- Chain BM
- 30S ribosomal protein S13
- Chain D1
- Large subunit ribosomal RNA; LSU rRNA
- Chain D2
- tRNA (5'-D(*AP*UP*CP*CP*CP*CP*GP*UP*GP*UP*CP*CP*UP*UP*GP*GP*UP*UP*CP*G)-3')
- Chain DV
- Transfer RNA; tRNA
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