IL_4WT8_177

3D structure

PDB id

4WT8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

CUAG*CGAAG

Length

9 nucleotides

Bulged bases

4WT8|1|C1|A|1600

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WT8_177 not in the Motif Atlas

Homologous match to IL_7RQB_057

Geometric discrepancy: 0.0914

The information below is about IL_7RQB_057

Detailed Annotation

tSH-tHW

Broad Annotation

No text annotation

Motif group

IL_04059.1

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

13

Unit IDs

4WT8|1|C1|C|1482
4WT8|1|C1|U|1483
4WT8|1|C1|A|1484
4WT8|1|C1|G|1485
*
4WT8|1|C1|C|1597
4WT8|1|C1|G|1598
4WT8|1|C1|A|1599
4WT8|1|C1|A|1600
4WT8|1|C1|G|1601

Current chains

Chain C1

23S rRNA (2899-MER)

Nearby chains