IL_4WT8_193

3D structure

PDB id

4WT8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

UCAAG*CGAAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WT8_193 not in the Motif Atlas

Homologous match to IL_7RQB_074

Geometric discrepancy: 0.126

The information below is about IL_7RQB_074

Detailed Annotation

UAA/GAN with extra pair

Broad Annotation

No text annotation

Motif group

IL_90318.1

Basepair signature

cWW-tSH-L-R-L-R-cWW

Number of instances in this motif group

3

Unit IDs

4WT8|1|C1|U|1881
4WT8|1|C1|C|1882
4WT8|1|C1|A|1883
4WT8|1|C1|A|1884
4WT8|1|C1|G|1885
*
4WT8|1|C1|C|1908
4WT8|1|C1|G|1909
4WT8|1|C1|A|1910
4WT8|1|C1|A|1911
4WT8|1|C1|G|1912

Current chains

Chain C1

23S rRNA (2899-MER)

Nearby chains

Chain C3

Transfer RNA; tRNA

Chain CB

50S ribosomal protein L2