IL_4WT8_224

3D structure

PDB id

4WT8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

UGG*CCA

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary: UGG,CCA

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WT8_224 not in the Motif Atlas

Geometric match to IL_7A0S_031

Geometric discrepancy: 0.2377

The information below is about IL_7A0S_031

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_87907.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

179

Unit IDs

4WT8|1|C1|U|2695
4WT8|1|C1|G|2696
4WT8|1|C1|G|2697
*
4WT8|1|C1|C|2735
4WT8|1|C1|C|2736
4WT8|1|C1|A|2737

Current chains

Chain C1

23S rRNA (2899-MER)

Nearby chains

Chain CC

50S ribosomal protein L3

Chain CN

50S ribosomal protein L14

Chain CQ

50S ribosomal protein L17

Chain CS

50S ribosomal protein L19