IL_4WT8_240
3D structure
- PDB id
- 4WT8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- UGG*CUG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4WT8_240 not in the Motif Atlas
- Geometric match to IL_7A0S_107
- Geometric discrepancy: 0.2518
- The information below is about IL_7A0S_107
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_71625.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 65
Unit IDs
4WT8|1|Cs|U|80
4WT8|1|Cs|G|81
4WT8|1|Cs|G|82
*
4WT8|1|Cs|C|95
4WT8|1|Cs|U|96
4WT8|1|Cs|G|97
Current chains
- Chain Cs
- 5S rRNA (119-MER)
Nearby chains
- Chain C1
- Large subunit ribosomal RNA; LSU rRNA
- Chain CL
- 50S ribosomal protein L30
- Chain CP
- 50S ribosomal protein L16
- Chain CZ
- 50S ribosomal protein L25
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