IL_4WT8_252

3D structure

PDB id

4WT8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

CAG*UGGG

Length

7 nucleotides

Bulged bases

4WT8|1|D1|G|375

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WT8_252 not in the Motif Atlas

Homologous match to IL_7RQB_012

Geometric discrepancy: 0.0951

The information below is about IL_7RQB_012

Detailed Annotation

Isolated tHS basepair with bulges

Broad Annotation

No text annotation

Motif group

IL_38958.7

Basepair signature

cWW-tHS-cWW

Number of instances in this motif group

15

Unit IDs

4WT8|1|D1|C|311
4WT8|1|D1|A|312
4WT8|1|D1|G|313
*
4WT8|1|D1|U|373
4WT8|1|D1|G|374
4WT8|1|D1|G|375
4WT8|1|D1|G|376

Current chains

Chain D1

23S rRNA (2899-MER)

Nearby chains