IL_4WT8_254
3D structure
- PDB id
- 4WT8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- GAAC*GAGUGAAAUAGAGC
- Length
- 18 nucleotides
- Bulged bases
- 4WT8|1|D1|U|528, 4WT8|1|D1|G|532
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4WT8_254 not in the Motif Atlas
- Homologous match to IL_7RQB_014
- Geometric discrepancy: 0.0659
- The information below is about IL_7RQB_014
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_60992.6
- Basepair signature
- cWW-cWS-tSH-L-tHH-tWH-cWW-tSS-tSH-L-L
- Number of instances in this motif group
- 6
Unit IDs
4WT8|1|D1|G|506
4WT8|1|D1|A|507
4WT8|1|D1|A|508
4WT8|1|D1|C|509
*
4WT8|1|D1|G|520
4WT8|1|D1|A|521
4WT8|1|D1|G|522
4WT8|1|D1|U|523
4WT8|1|D1|G|524
4WT8|1|D1|A|525
4WT8|1|D1|A|526
4WT8|1|D1|A|527
4WT8|1|D1|U|528
4WT8|1|D1|A|529
4WT8|1|D1|G|530
4WT8|1|D1|A|531
4WT8|1|D1|G|532
4WT8|1|D1|C|533
Current chains
- Chain D1
- 23S rRNA (2899-MER)
Nearby chains
- Chain DW
- 50S ribosomal protein L22
- Chain DY
- 50S ribosomal protein L24
Coloring options: