IL_4WT8_263
3D structure
- PDB id
- 4WT8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- GGA*UAACC
- Length
- 8 nucleotides
- Bulged bases
- 4WT8|1|D1|G|822, 4WT8|1|D1|A|834, 4WT8|1|D1|A|835, 4WT8|1|D1|C|836
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4WT8_263 not in the Motif Atlas
- Homologous match to IL_5J7L_265
- Geometric discrepancy: 0.0968
- The information below is about IL_5J7L_265
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_06549.2
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 6
Unit IDs
4WT8|1|D1|G|821
4WT8|1|D1|G|822
4WT8|1|D1|A|823
*
4WT8|1|D1|U|833
4WT8|1|D1|A|834
4WT8|1|D1|A|835
4WT8|1|D1|C|836
4WT8|1|D1|C|837
Current chains
- Chain D1
- 23S rRNA (2899-MER)
Nearby chains
- Chain D8
- 50S ribosomal protein L34
- Chain DB
- 50S ribosomal protein L2
- Chain DD
- 50S ribosomal protein L4
- Chain DW
- 50S ribosomal protein L22
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