IL_4WT8_293

3D structure

PDB id

4WT8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

CGAUG*CUAAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WT8_293 not in the Motif Atlas

Homologous match to IL_7RQB_055

Geometric discrepancy: 0.1138

The information below is about IL_7RQB_055

Detailed Annotation

UAA/GAN

Broad Annotation

No text annotation

Motif group

IL_89002.2

Basepair signature

cWW-tWH-L-tHS-cWW

Number of instances in this motif group

20

Unit IDs

4WT8|1|D1|C|1462
4WT8|1|D1|G|1463
4WT8|1|D1|A|1464
4WT8|1|D1|U|1465
4WT8|1|D1|G|1466
*
4WT8|1|D1|C|1623
4WT8|1|D1|U|1624
4WT8|1|D1|A|1625
4WT8|1|D1|A|1626
4WT8|1|D1|G|1627

Current chains

Chain D1

23S rRNA (2899-MER)

Nearby chains