IL_4WT8_298

3D structure

PDB id

4WT8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

UG*CAACAAG

Length

9 nucleotides

Bulged bases

4WT8|1|D1|C|1554

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WT8_298 not in the Motif Atlas

Geometric match to IL_7RQB_061

Geometric discrepancy: 0.2653

The information below is about IL_7RQB_061

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_52493.1

Basepair signature

cWW-L-cWW-L-L

Number of instances in this motif group

2

Unit IDs

4WT8|1|D1|U|1527
4WT8|1|D1|G|1528
*
4WT8|1|D1|C|1551
4WT8|1|D1|A|1552
4WT8|1|D1|A|1553
4WT8|1|D1|C|1554
4WT8|1|D1|A|1555
4WT8|1|D1|A|1556
4WT8|1|D1|G|1557

Current chains

Chain D1

23S rRNA (2899-MER)

Nearby chains