IL_4WT8_341
3D structure
- PDB id
- 4WT8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- CCUCU*AUG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4WT8_341 not in the Motif Atlas
- Homologous match to IL_7RQB_104
- Geometric discrepancy: 0.1038
- The information below is about IL_7RQB_104
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_63596.6
- Basepair signature
- cWW-cWS-cSH-tWH-cWW-L
- Number of instances in this motif group
- 14
Unit IDs
4WT8|1|D1|C|2691
4WT8|1|D1|C|2692
4WT8|1|D1|U|2693
4WT8|1|D1|C|2694
4WT8|1|D1|U|2695
*
4WT8|1|D1|A|2737
4WT8|1|D1|U|2738
4WT8|1|D1|G|2739
Current chains
- Chain D1
- 23S rRNA (2899-MER)
Nearby chains
- Chain DC
- 50S ribosomal protein L3
- Chain DN
- 50S ribosomal protein L14
- Chain DQ
- 50S ribosomal protein L17
- Chain DS
- 50S ribosomal protein L19
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