IL_4WT8_384
3D structure
- PDB id
- 4WT8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- CUGUGAACC*GGGGAG
- Length
- 15 nucleotides
- Bulged bases
- 4WT8|1|D1|U|2153
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4WT8_384 not in the Motif Atlas
- Geometric match to IL_4LFB_031
- Geometric discrepancy: 0.3368
- The information below is about IL_4LFB_031
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_95727.1
- Basepair signature
- cWW-L-tSH-L-tHW-tHS-R-cWW-L
- Number of instances in this motif group
- 1
Unit IDs
4WT8|1|D1|C|2150
4WT8|1|D1|U|2151
4WT8|1|D1|G|2152
4WT8|1|D1|U|2153
4WT8|1|D1|G|2154
4WT8|1|D1|A|2155
4WT8|1|D1|A|2156
4WT8|1|D1|C|2157
4WT8|1|D1|C|2158
*
4WT8|1|D1|G|2175
4WT8|1|D1|G|2176
4WT8|1|D1|G|2177
4WT8|1|D1|G|2178
4WT8|1|D1|A|2179
4WT8|1|D1|G|2180
Current chains
- Chain D1
- 23S rRNA (2899-MER)
Nearby chains
- Chain Ab
- Small subunit ribosomal RNA; SSU rRNA
- Chain DA
- 50S ribosomal protein L1
Coloring options: