IL_4WWW_018

3D structure

PDB id

4WWW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to CEM-101

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GG*UGACC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WWW_018 not in the Motif Atlas

Homologous match to IL_6CZR_125

Geometric discrepancy: 0.1738

The information below is about IL_6CZR_125

Detailed Annotation

C-loop

Broad Annotation

No text annotation

Motif group

IL_99460.1

Basepair signature

cWW-L-cWW-L-L

Number of instances in this motif group

3

Unit IDs

4WWW|1|QA|G|292
4WWW|1|QA|G|293
*
4WWW|1|QA|U|304
4WWW|1|QA|G|305
4WWW|1|QA|A|306
4WWW|1|QA|C|307
4WWW|1|QA|C|308

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QP

30S ribosomal protein S16