IL_4WWW_081

3D structure

PDB id

4WWW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to CEM-101

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

UAG*CAAAA

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WWW_081 not in the Motif Atlas

Homologous match to IL_5J7L_254

Geometric discrepancy: 0.0952

The information below is about IL_5J7L_254

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_69440.3

Basepair signature

cWW-L-R-cSH-cWW

Number of instances in this motif group

3

Unit IDs

4WWW|1|RA|U|293
4WWW|1|RA|A|294
4WWW|1|RA|G|295
*
4WWW|1|RA|C|343
4WWW|1|RA|A|344
4WWW|1|RA|A|345
4WWW|1|RA|A|346
4WWW|1|RA|A|347

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RU

50S ribosomal protein L24