IL_4WWW_125

3D structure

PDB id

4WWW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to CEM-101

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CUAU*AAAUG

Length

9 nucleotides

Bulged bases

4WWW|1|RA|U|1554

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WWW_125 not in the Motif Atlas

Homologous match to IL_5J7L_297

Geometric discrepancy: 0.0686

The information below is about IL_5J7L_297

Detailed Annotation

tSH-tHW

Broad Annotation

No text annotation

Motif group

IL_99646.2

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

6

Unit IDs

4WWW|1|RA|C|1437
4WWW|1|RA|U|1438
4WWW|1|RA|A|1439
4WWW|1|RA|U|1440
*
4WWW|1|RA|A|1551
4WWW|1|RA|A|1552
4WWW|1|RA|A|1553
4WWW|1|RA|U|1554
4WWW|1|RA|G|1555

Current chains

Chain RA

23S rRNA

Nearby chains