IL_4WWW_259

3D structure

PDB id

4WWW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to CEM-101

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

AAG*CUU

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary: AAG,CUU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WWW_259 not in the Motif Atlas

Geometric match to IL_4V9F_105

Geometric discrepancy: 0.1614

The information below is about IL_4V9F_105

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

214

Unit IDs

4WWW|1|YA|A|5
4WWW|1|YA|A|6
4WWW|1|YA|G|7
*
4WWW|1|YA|C|2896
4WWW|1|YA|U|2897
4WWW|1|YA|U|2898

Current chains

Chain YA

23S rRNA

Nearby chains

Chain YJ

50S ribosomal protein L13