IL_4WWW_374

3D structure

PDB id

4WWW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to CEM-101

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

UAAG*CUG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WWW_374 not in the Motif Atlas

Homologous match to IL_6CZR_136

Geometric discrepancy: 0.2518

The information below is about IL_6CZR_136

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_05564.3

Basepair signature

cWW-cSH-cWW-cWW

Number of instances in this motif group

14

Unit IDs

4WWW|1|QA|U|594
4WWW|1|QA|A|595
4WWW|1|QA|A|596
4WWW|1|QA|G|597
*
4WWW|1|QA|C|643
4WWW|1|QA|U|644
4WWW|1|QA|G|645

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QH

30S ribosomal protein S8

Chain QQ

30S ribosomal protein S17