IL_4WZD_193
3D structure
- PDB id
- 4WZD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with cognate tRNA-Tyr in the P-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CAUCAG*CGACGACG
- Length
- 14 nucleotides
- Bulged bases
- 4WZD|1|1G|U|244||||P_1, 4WZD|1|1G|C|280||||P_1
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4WZD_193 not in the Motif Atlas
- Homologous match to IL_4LFB_011
- Geometric discrepancy: 0.079
- The information below is about IL_4LFB_011
- Detailed Annotation
- Kink-turn with non-sequential stacking
- Broad Annotation
- Kink-turn
- Motif group
- IL_46174.3
- Basepair signature
- cWW-cSS-tSS-tSH-L-cWW-tHW-cWW
- Number of instances in this motif group
- 5
Unit IDs
4WZD|1|1G|C|242||||P_1
4WZD|1|1G|A|243||||P_1
4WZD|1|1G|U|244||||P_1
4WZD|1|1G|C|245||||P_1
4WZD|1|1G|A|246||||P_1
4WZD|1|1G|G|247||||P_1
*
4WZD|1|1G|C|277||||P_1
4WZD|1|1G|G|278||||P_1
4WZD|1|1G|A|279||||P_1
4WZD|1|1G|C|280||||P_1
4WZD|1|1G|G|281||||P_1
4WZD|1|1G|A|282||||P_1
4WZD|1|1G|C|283||||P_1
4WZD|1|1G|G|284||||P_1
Current chains
- Chain 1G
- 16S ribosomal RNA
Nearby chains
- Chain 3A
- 30S ribosomal protein S12
- Chain 8A
- 30S ribosomal protein S17
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