IL_4WZO_251

3D structure

PDB id

4WZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-fMet and mRNA

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CGGAUU*AUGAAG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WZO_251 not in the Motif Atlas

Homologous match to IL_4LFB_055

Geometric discrepancy: 0.163

The information below is about IL_4LFB_055

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_85536.2

Basepair signature

cWW-tSH-L-R-tHS-cWW-cWW

Number of instances in this motif group

8

Unit IDs

4WZO|1|1G|C|1303
4WZO|1|1G|G|1304
4WZO|1|1G|G|1305
4WZO|1|1G|A|1306
4WZO|1|1G|U|1307
4WZO|1|1G|U|1308
*
4WZO|1|1G|A|1329
4WZO|1|1G|U|1330
4WZO|1|1G|G|1331
4WZO|1|1G|A|1332
4WZO|1|1G|A|1333
4WZO|1|1G|G|1334

Current chains

Chain 1G

16S ribosomal RNA

Nearby chains

Chain 1B

30S ribosomal protein Thx

Chain 4A

30S ribosomal protein S13