IL_4X4P_002

3D structure

PDB id

4X4P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the A.fulgidus CCA-adding enzyme in complex with a G70A arginyl-tRNA minihelix ending in CCAC

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CCG*CG

Length

5 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4X4P_002 not in the Motif Atlas

Geometric match to IL_5Z1I_003

Geometric discrepancy: 0.2345

The information below is about IL_5Z1I_003

Detailed Annotation

Decoding loop related

Broad Annotation

Decoding loop related

Motif group

IL_31737.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

11

Unit IDs

4X4P|1|D|C|3
4X4P|1|D|C|4
4X4P|1|D|G|5
*
4X4P|1|D|C|27
4X4P|1|D|G|32

Current chains

Chain D

G70A tRNA minihelix ending in CCAC

Nearby chains

Chain C

CCA-adding enzyme