IL_4XEJ_106
3D structure
- PDB id
- 4XEJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- IRES bound to bacterial Ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.8 Å
Loop
- Sequence
- CUAAG*CGAAG
- Length
- 10 nucleotides
- Bulged bases
- 4XEJ|1|A23S|A|1156
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4XEJ_106 not in the Motif Atlas
- Homologous match to IL_7RQB_036
- Geometric discrepancy: 0.113
- The information below is about IL_7RQB_036
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_89002.2
- Basepair signature
- cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 20
Unit IDs
4XEJ|1|A23S|C|998
4XEJ|1|A23S|U|999
4XEJ|1|A23S|A|1000
4XEJ|1|A23S|A|1001
4XEJ|1|A23S|G|1002
*
4XEJ|1|A23S|C|1153
4XEJ|1|A23S|G|1154
4XEJ|1|A23S|A|1155
4XEJ|1|A23S|A|1156
4XEJ|1|A23S|G|1157
Current chains
- Chain A23S
- 23S ribosomal RNA
Nearby chains
- Chain A5S
- 5S ribosomal RNA; 5S rRNA
- Chain AL20
- 50S ribosomal protein L20
- Chain AL21
- 50S ribosomal protein L21
- Chain AL30
- 50S ribosomal protein L30
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