IL_4XEJ_316
3D structure
- PDB id
- 4XEJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- IRES bound to bacterial Ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.8 Å
Loop
- Sequence
- CGAUGAAG*UGGAG
- Length
- 13 nucleotides
- Bulged bases
- 4XEJ|1|B23S|U|1211
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4XEJ_316 not in the Motif Atlas
- Homologous match to IL_7RQB_047
- Geometric discrepancy: 0.1545
- The information below is about IL_7RQB_047
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_70923.2
- Basepair signature
- cWW-tSS-tSH-L-tHS-tHS-cWW
- Number of instances in this motif group
- 28
Unit IDs
4XEJ|1|B23S|C|1208
4XEJ|1|B23S|G|1209
4XEJ|1|B23S|A|1210
4XEJ|1|B23S|U|1211
4XEJ|1|B23S|G|1212
4XEJ|1|B23S|A|1213
4XEJ|1|B23S|A|1214
4XEJ|1|B23S|G|1215
*
4XEJ|1|B23S|U|1234
4XEJ|1|B23S|G|1235
4XEJ|1|B23S|G|1236
4XEJ|1|B23S|A|1237
4XEJ|1|B23S|G|1238
Current chains
- Chain B23S
- 23S ribosomal RNA
Nearby chains
- Chain BL20
- 50S ribosomal protein L20
Coloring options: